Plot histogram of allelic ratio distribution across all genes with beta function based on alpha and beta global parameters

Plot histogram of allelic ratio distribution across all genes with beta function based on alpha and beta global parameters

Usage

plot_glob_params(a1_counts, tot_counts, glob_params, min_counts = 5)

Arguments

a1_counts

Integer matrix (genes x cells): allele-1 counts.

tot_counts

Integer matrix (genes x cells): total counts (same dimenstions and rownames as a1_counts).

glob_params

Named vector/list with elements alpha, beta, mu, theta as returned by glob_disp().

min_counts

Integer >= 0. Minimum reads per cell to include (default 0). Cells with a number of mapped reads less than min_counts are excluded

Examples

plot_glob_params(a1_counts,
                 tot_counts,
                 glob_params,
                 min_counts = 5)
#> Error: object 'a1_counts' not found